Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | EJI01_24860 | Not Available | Negative | 5167143 - 5168072 | 32640.8 |
| lyse family translocator | EJI01_24865 | Not Available | Negative | 5168069 - 5168668 | 21234.6 |
| plp-dependent aminotransferase family protein | EJI01_24870 | Not Available | Positive | 5168769 - 5170196 | 51542.1 |
| phospholipase d family protein | EJI01_24875 | Not Available | Negative | 5170207 - 5171949 | 61748.9 |
| atp-binding cassette domain-containing protein | EJI01_24880 | Not Available | Negative | 5172024 - 5173931 | 69650.7 |
| copper chaperone | EJI01_24885 | Not Available | Negative | 5174287 - 5174481 | 6879.09 |
| alkene reductase | EJI01_24890 | Not Available | Negative | 5174620 - 5175723 | 39550.6 |
| ybfb/yjij family mfs transporter | EJI01_24895 | Not Available | Positive | 5175844 - 5177058 | 41346.0 |
| glutathione transferase gsta | EJI01_24900 | Not Available | Negative | 5177051 - 5177659 | 22635.1 |
| duf1328 domain-containing protein | EJI01_24905 | Not Available | Positive | 5177843 - 5178028 | 5974.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
