Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | EJI01_24805 | Not Available | Negative | 5155636 - 5156310 | 24924.6 |
| autotransporter outer membrane beta-barrel domain-containing protein | EJI01_24810 | Not Available | Positive | 5156441 - 5160463 | 131686.0 |
| intradiol ring-cleavage dioxygenase | EJI01_24815 | Not Available | Positive | 5160516 - 5161154 | 22814.9 |
| threonine dehydratase | EJI01_24820 | Not Available | Negative | 5161171 - 5162136 | 34058.7 |
| lyse family translocator | EJI01_24825 | Not Available | Negative | 5162140 - 5162775 | 22459.4 |
| voc family protein | EJI01_24830 | Not Available | Negative | 5162777 - 5163463 | 24432.3 |
| phzf family phenazine biosynthesis protein | EJI01_24835 | Not Available | Negative | 5163572 - 5164483 | 32011.5 |
| glutathione s-transferase | EJI01_24840 | Not Available | Negative | 5164488 - 5165129 | 23989.6 |
| arac family transcriptional regulator | EJI01_24850 | Not Available | Negative | 5165265 - 5165876 | 21016.4 |
| plp-dependent aminotransferase family protein | EJI01_24855 | Not Available | Negative | 5165902 - 5167116 | 43198.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
