Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | EJI01_24635 | Not Available | Negative | 5120134 - 5120832 | 25171.2 |
| c4-dicarboxylate transporter dcta | EJI01_24640 | Not Available | Negative | 5120855 - 5122189 | 46288.1 |
| hypothetical protein | EJI01_24650 | Not Available | Negative | 5122845 - 5123648 | 29809.5 |
| fad-dependent oxidoreductase | EJI01_24660 | Not Available | Negative | 5126110 - 5127660 | 56150.2 |
| duf3883 domain-containing protein | EJI01_24665 | Not Available | Positive | 5127857 - 5128771 | 33309.8 |
| hypothetical protein | EJI01_24670 | Not Available | Positive | 5128963 - 5129304 | 12595.0 |
| gntr family transcriptional regulator | EJI01_24675 | Not Available | Negative | 5129392 - 5130081 | 25110.5 |
| dihydroxy-acid dehydratase | EJI01_24680 | Not Available | Positive | 5130164 - 5131891 | 62624.7 |
| ribonuclease activity regulator rraa | EJI01_24685 | Not Available | Positive | 5131932 - 5132642 | 25593.7 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_24690 | Not Available | Positive | 5132682 - 5133662 | 34575.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
