Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside deaminase | EJI01_24585 | Not Available | Negative | 5108104 - 5108601 | 17793.3 |
| abc transporter permease | EJI01_24590 | Not Available | Negative | 5108594 - 5109364 | 28020.0 |
| abc transporter atp-binding protein | EJI01_24595 | Not Available | Negative | 5109361 - 5110212 | 31825.7 |
| taurine abc transporter permease | EJI01_24600 | Not Available | Negative | 5110349 - 5111380 | 36218.8 |
| nadp-dependent malic enzyme | EJI01_24605 | Not Available | Negative | 5111561 - 5113861 | 81994.3 |
| 2-hydroxy-3-oxopropionate reductase | EJI01_24610 | Not Available | Negative | 5114353 - 5115252 | 30699.4 |
| hydroxypyruvate isomerase | EJI01_24615 | Not Available | Negative | 5115287 - 5116066 | 28515.3 |
| glyoxylate carboligase | EJI01_24620 | Not Available | Negative | 5116188 - 5117981 | 65138.7 |
| lysr family transcriptional regulator | EJI01_24625 | Not Available | Positive | 5118095 - 5118997 | 32858.9 |
| ai-2e family transporter | EJI01_24630 | Not Available | Negative | 5119029 - 5120096 | 38572.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
