Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | EJI01_24535 | Not Available | Positive | 5101288 - 5102277 | 34792.2 |
| paai family thioesterase | EJI01_24540 | Not Available | Positive | 5102274 - 5102675 | 14002.8 |
| coa transferase | EJI01_24545 | Not Available | Positive | 5102696 - 5103919 | 43325.9 |
| hypothetical protein | EJI01_24550 | Not Available | Positive | 5103948 - 5104214 | 9908.43 |
| gaf domain-containing protein | EJI01_24555 | Not Available | Positive | 5104322 - 5104780 | 16684.8 |
| transcriptional regulator gcva | EJI01_24560 | Not Available | Negative | 5104813 - 5105709 | 33250.4 |
| sdr family oxidoreductase | EJI01_24565 | Not Available | Positive | 5105928 - 5106809 | 31759.6 |
| osmc family peroxiredoxin | EJI01_24570 | Not Available | Positive | 5106930 - 5107328 | 14470.3 |
| hypothetical protein | EJI01_24575 | Not Available | Positive | 5107433 - 5107705 | 8764.01 |
| ethd family reductase | EJI01_24580 | Not Available | Negative | 5107716 - 5108030 | 11449.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
