Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | EJI01_02405 | Not Available | Negative | 508119 - 508679 | 20634.8 |
| ump kinase | EJI01_02410 | Not Available | Negative | 508694 - 509416 | 25384.0 |
| elongation factor ts | EJI01_02415 | Not Available | Negative | 509509 - 510432 | 32451.1 |
| 30s ribosomal protein s2 | EJI01_02420 | Not Available | Negative | 510547 - 511302 | 27561.3 |
| amidase | EJI01_02425 | Not Available | Positive | 511491 - 512822 | 46414.6 |
| fad-dependent oxidoreductase | EJI01_02430 | Not Available | Positive | 512877 - 514133 | 45173.6 |
| nad(p)h-hydrate dehydratase | EJI01_02435 | Not Available | Positive | 514146 - 515594 | 49296.4 |
| sdr family oxidoreductase | EJI01_02440 | Not Available | Negative | 515601 - 516362 | 26588.0 |
| ribonuclease r | EJI01_02445 | Not Available | Negative | 516376 - 518658 | 84225.3 |
| Trna-leu | Not Available | Not Available | Positive | 518724 - 518808 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
