Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-glutamate dehydrogenase | EJI01_24380 | Not Available | Positive | 5067183 - 5072006 | 177850.0 |
| hypothetical protein | EJI01_24385 | Not Available | Positive | 5072122 - 5072325 | 7335.84 |
| hamp domain-containing histidine kinase | EJI01_24390 | Not Available | Positive | 5072473 - 5073882 | 52400.7 |
| response regulator transcription factor | EJI01_24395 | Not Available | Negative | 5074010 - 5074612 | 21772.3 |
| tryptophan--trna ligase | EJI01_24400 | Not Available | Negative | 5074676 - 5076001 | 48534.9 |
| site-2 protease family protein | EJI01_24405 | Not Available | Negative | 5076012 - 5076683 | 24376.6 |
| threonylcarbamoyl-amp synthase | EJI01_24410 | Not Available | Negative | 5076719 - 5077354 | 23184.1 |
| dmt family transporter | EJI01_24415 | Not Available | Negative | 5077371 - 5078342 | 34556.1 |
| php domain-containing protein | EJI01_24420 | Not Available | Negative | 5078312 - 5079166 | 30968.5 |
| magnesium transporter cora | EJI01_24425 | Not Available | Negative | 5079193 - 5080221 | 37707.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
