Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_24330 | Not Available | Negative | 5049494 - 5050840 | 50946.3 |
| atp-binding protein | EJI01_24335 | Not Available | Negative | 5050851 - 5054459 | 135690.0 |
| duf4194 domain-containing protein | EJI01_24340 | Not Available | Negative | 5054456 - 5055205 | 27740.7 |
| duf3375 domain-containing protein | EJI01_24345 | Not Available | Negative | 5055189 - 5056655 | 55452.9 |
| duf3320 domain-containing protein | EJI01_24350 | Not Available | Negative | 5056652 - 5062249 | 205810.0 |
| duf998 domain-containing protein | EJI01_24355 | Not Available | Negative | 5062666 - 5063322 | 23687.1 |
| hypothetical protein | EJI01_24360 | Not Available | Positive | 5063836 - 5064042 | 7647.84 |
| sel1 repeat family protein | EJI01_24365 | Not Available | Negative | 5064498 - 5065022 | 19073.6 |
| hypothetical protein | EJI01_24370 | Not Available | Negative | 5065019 - 5066048 | 36861.4 |
| fructose-bisphosphate aldolase class i | EJI01_24375 | Not Available | Negative | 5066049 - 5067065 | 36206.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
