Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin reductase family protein | EJI01_24270 | Not Available | Negative | 5038820 - 5039458 | 22862.6 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_24275 | Not Available | Positive | 5039658 - 5040626 | 34608.6 |
| rida family protein | EJI01_24280 | Not Available | Positive | 5040623 - 5041048 | 15142.2 |
| 2-pyrone-4,6-dicarboxylate hydrolase | EJI01_24285 | Not Available | Positive | 5041070 - 5041957 | 32318.6 |
| faa hydrolase family protein | EJI01_24290 | Not Available | Positive | 5041954 - 5042829 | 31321.2 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | EJI01_24295 | Not Available | Positive | 5042826 - 5043638 | 29202.1 |
| 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase | EJI01_24300 | Not Available | Positive | 5043647 - 5044462 | 29161.1 |
| abrb/maze/spovt family dna-binding domain-containing protein | EJI01_24310 | Not Available | Positive | 5045599 - 5045841 | 8895.75 |
| endoribonuclease mazf | EJI01_24315 | Not Available | Positive | 5045841 - 5046179 | 11922.4 |
| hypothetical protein | EJI01_24325 | Not Available | Positive | 5047004 - 5049316 | 86918.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
