Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prevent-host-death protein | EJI01_24160 | Not Available | Positive | 5010861 - 5011142 | 10314.2 |
| type ii toxin-antitoxin system rele/pare family toxin | EJI01_24165 | Not Available | Positive | 5011139 - 5011453 | 11995.1 |
| hypothetical protein | EJI01_24170 | Not Available | Negative | 5011530 - 5012198 | 24493.4 |
| diguanylate cyclase | EJI01_24175 | Not Available | Negative | 5012775 - 5013107 | 12317.4 |
| diguanylate cyclase | EJI01_24180 | Not Available | Positive | 5013373 - 5016156 | 103544.0 |
| eal domain-containing protein | EJI01_24185 | Not Available | Positive | 5016024 - 5016896 | 32318.2 |
| ggdef domain-containing protein | EJI01_24190 | Not Available | Negative | 5016947 - 5018629 | 61851.4 |
| tetratricopeptide repeat protein | EJI01_24200 | Not Available | Negative | 5020285 - 5023548 | 117126.0 |
| cellulase | EJI01_24205 | Not Available | Negative | 5023512 - 5024723 | 44444.1 |
| cellulose biosynthesis cyclic di-gmp-binding regulatory protein bcsb | EJI01_24210 | Not Available | Negative | 5024747 - 5027008 | 80358.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
