Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | EJI01_24040 | Not Available | Positive | 4989114 - 4989656 | 20091.0 |
| sulfurtransferase tusa family protein | EJI01_24045 | Not Available | Positive | 4989698 - 4989925 | 8463.23 |
| sgnh/gdsl hydrolase family protein | EJI01_24050 | Not Available | Positive | 4989936 - 4991048 | 40208.8 |
| utp--glucose-1-phosphate uridylyltransferase galu | EJI01_24055 | Not Available | Negative | 4991029 - 4991919 | 32369.2 |
| valine--trna ligase | EJI01_24060 | Not Available | Negative | 4992014 - 4994884 | 107518.0 |
| peroxide stress protein yaaa | EJI01_24065 | Not Available | Positive | 4995021 - 4995806 | 29220.2 |
| 2-oxoglutarate-dependent dioxygenase | EJI01_24070 | Not Available | Positive | 4995809 - 4996648 | 30549.4 |
| alpha/beta hydrolase | EJI01_24075 | Not Available | Positive | 4996692 - 4997585 | 31625.7 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | EJI01_24080 | Not Available | Positive | 4997582 - 4998439 | 32048.9 |
| duf2905 domain-containing protein | EJI01_24085 | Not Available | Negative | 4999076 - 4999279 | 7850.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
