Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EJI01_23990 | Not Available | Positive | 4981070 - 4981840 | 27859.7 |
| abc transporter atp-binding protein | EJI01_23995 | Not Available | Positive | 4981842 - 4982558 | 25555.6 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_24000 | Not Available | Negative | 4982561 - 4983535 | 33676.6 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | EJI01_24005 | Not Available | Negative | 4983571 - 4984635 | 38955.6 |
| nad-dependent epimerase/dehydratase family protein | EJI01_24010 | Not Available | Positive | 4984677 - 4985600 | 33750.0 |
| serine protease | EJI01_24015 | Not Available | Positive | 4985816 - 4986700 | 30347.9 |
| luxr family transcriptional regulator | EJI01_24020 | Not Available | Positive | 4986715 - 4987080 | 12602.2 |
| hypothetical protein | EJI01_24025 | Not Available | Positive | 4987214 - 4987579 | 13367.6 |
| Trna-leu | Not Available | Not Available | Positive | 4988078 - 4988162 | Not Available |
| cysteine synthase cysm | EJI01_24035 | Not Available | Positive | 4988204 - 4989106 | 32527.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
