Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid-a-disaccharide synthase | EJI01_02355 | Not Available | Negative | 497574 - 498692 | 40767.9 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | EJI01_02360 | Not Available | Negative | 498727 - 499515 | 27783.4 |
| 3-hydroxyacyl-acp dehydratase fabz | EJI01_02365 | Not Available | Negative | 499529 - 499972 | 16583.6 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | EJI01_02370 | Not Available | Negative | 499969 - 500955 | 34320.6 |
| omph family outer membrane protein | EJI01_02375 | Not Available | Negative | 500970 - 501503 | 19882.5 |
| outer membrane protein assembly factor bama | EJI01_02380 | Not Available | Negative | 501503 - 503917 | 89487.4 |
| rip metalloprotease rsep | EJI01_02385 | Not Available | Negative | 503956 - 505326 | 49487.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | EJI01_02390 | Not Available | Negative | 505351 - 506538 | 41799.6 |
| phosphatidate cytidylyltransferase | EJI01_02395 | Not Available | Negative | 506535 - 507380 | 30270.3 |
| di-trans,poly-cis-decaprenylcistransferase | EJI01_02400 | Not Available | Negative | 507385 - 508119 | 26815.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
