Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa desaturase | EJI01_23940 | Not Available | Positive | 4970446 - 4971660 | 46048.8 |
| 50s ribosomal protein l33 | EJI01_23945 | Not Available | Negative | 4971798 - 4971971 | 6547.1 |
| 50s ribosomal protein l28 | EJI01_23950 | Not Available | Negative | 4971983 - 4972216 | 8779.65 |
| thioredoxin-disulfide reductase | EJI01_23955 | Not Available | Negative | 4972396 - 4973358 | 34481.1 |
| crp/fnr family transcriptional regulator | EJI01_23960 | Not Available | Positive | 4973522 - 4974196 | 24916.4 |
| dna translocase ftsk | EJI01_23965 | Not Available | Positive | 4974327 - 4976705 | 86654.5 |
| outer membrane lipoprotein carrier protein lola | EJI01_23970 | Not Available | Positive | 4976717 - 4977355 | 22642.1 |
| replication-associated recombination protein a | EJI01_23975 | Not Available | Positive | 4977375 - 4978667 | 47658.9 |
| branched-chain amino acid abc transporter permease | EJI01_23980 | Not Available | Positive | 4978922 - 4979851 | 32498.3 |
| abc transporter atp-binding protein | EJI01_23985 | Not Available | Positive | 4979865 - 4981052 | 41789.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
