Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | EJI01_23890 | Not Available | Positive | 4960652 - 4961209 | 20842.1 |
| enoyl-coa hydratase | EJI01_23895 | Not Available | Negative | 4961210 - 4961992 | 27534.2 |
| alpha/beta fold hydrolase | EJI01_23900 | Not Available | Negative | 4962003 - 4963382 | 49141.1 |
| acyl-coa dehydrogenase | EJI01_23905 | Not Available | Negative | 4963469 - 4964584 | 40008.7 |
| pimeloyl-coa dehydrogenase large subunit | EJI01_23910 | Not Available | Negative | 4964608 - 4965789 | 43942.6 |
| phosphoribosylglycinamide formyltransferase | EJI01_23915 | Not Available | Positive | 4965934 - 4966518 | 20701.1 |
| peptidase inhibitor i78 | EJI01_23920 | Not Available | Positive | 4966554 - 4966889 | 11173.5 |
| duf1653 domain-containing protein | EJI01_23925 | Not Available | Negative | 4966902 - 4967138 | 8934.8 |
| peptidase m48 | EJI01_23930 | Not Available | Positive | 4967174 - 4969030 | 69628.1 |
| rsmb/nop family class i sam-dependent rna methyltransferase | EJI01_23935 | Not Available | Positive | 4969043 - 4970314 | 46469.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
