Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na/pi cotransporter family protein | EJI01_23840 | Not Available | Negative | 4948685 - 4950343 | 59110.0 |
| phosphodiesterase | EJI01_23845 | Not Available | Negative | 4950379 - 4951200 | 30159.1 |
| abc transporter atp-binding protein | EJI01_23850 | Not Available | Negative | 4951197 - 4952255 | 38219.3 |
| abc transporter permease subunit | EJI01_23855 | Not Available | Negative | 4952245 - 4953042 | 28895.1 |
| abc transporter permease subunit | EJI01_23860 | Not Available | Negative | 4953050 - 4953856 | 28737.6 |
| extracellular solute-binding protein | EJI01_23865 | Not Available | Negative | 4953853 - 4954863 | 36457.8 |
| laci family dna-binding transcriptional regulator | EJI01_23870 | Not Available | Negative | 4954896 - 4955891 | 34786.0 |
| lipoprotein signal peptidase | EJI01_23875 | Not Available | Negative | 4955997 - 4956500 | 18330.7 |
| isoleucine--trna ligase | EJI01_23880 | Not Available | Negative | 4956497 - 4959334 | 105480.0 |
| bifunctional riboflavin kinase/fad synthetase | EJI01_23885 | Not Available | Negative | 4959450 - 4960487 | 37429.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
