Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine synthase | EJI01_23785 | Not Available | Positive | 4937378 - 4938145 | 28459.2 |
| type ii/iv secretion system protein | EJI01_23790 | Not Available | Positive | 4938142 - 4939932 | 65915.9 |
| tripartite tricarboxylate transporter tctb family protein | EJI01_23795 | Not Available | Positive | 4940054 - 4940542 | 17083.7 |
| tripartite tricarboxylate transporter permease | EJI01_23800 | Not Available | Positive | 4940556 - 4942070 | 53032.4 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_23805 | Not Available | Positive | 4942241 - 4943212 | 34033.3 |
| gamma-glutamyltransferase family protein | EJI01_23810 | Not Available | Positive | 4943217 - 4944830 | 57690.7 |
| dmt family transporter | EJI01_23820 | Not Available | Positive | 4944922 - 4945842 | 32619.1 |
| sdr family oxidoreductase | EJI01_23825 | Not Available | Positive | 4945862 - 4946653 | 27035.5 |
| dmt family transporter | EJI01_23830 | Not Available | Negative | 4946670 - 4947569 | 32467.4 |
| quinone oxidoreductase | EJI01_23835 | Not Available | Positive | 4947698 - 4948681 | 34408.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
