Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_23730 | Not Available | Negative | 4928139 - 4928477 | 11928.4 |
| alpha/beta fold hydrolase | EJI01_23735 | Not Available | Negative | 4928518 - 4929348 | 30736.8 |
| lysr family transcriptional regulator | EJI01_23740 | Not Available | Positive | 4929525 - 4930493 | 36259.2 |
| vwa domain-containing protein | EJI01_23750 | Not Available | Negative | 4931288 - 4932331 | 37766.3 |
| duf58 domain-containing protein | EJI01_23755 | Not Available | Negative | 4932328 - 4933323 | 37466.1 |
| aaa family atpase | EJI01_23760 | Not Available | Negative | 4933304 - 4934320 | 37046.0 |
| trypsin-like serine protease | EJI01_23765 | Not Available | Negative | 4934355 - 4935341 | 34150.7 |
| tatd family deoxyribonuclease | EJI01_23770 | Not Available | Positive | 4935431 - 4936291 | 30844.1 |
| hypothetical protein | EJI01_23775 | Not Available | Positive | 4936416 - 4936793 | 12662.1 |
| dna-deoxyinosine glycosylase | EJI01_23780 | Not Available | Positive | 4936857 - 4937378 | 18840.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
