Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | EJI01_23680 | Not Available | Negative | 4916693 - 4917082 | 13935.6 |
| abc transporter substrate-binding protein | EJI01_23685 | Not Available | Positive | 4917240 - 4918784 | 56329.9 |
| abc transporter permease | EJI01_23690 | Not Available | Positive | 4918806 - 4919747 | 33200.8 |
| abc transporter permease | EJI01_23695 | Not Available | Positive | 4919751 - 4920590 | 30156.1 |
| abc transporter atp-binding protein | EJI01_23700 | Not Available | Positive | 4920938 - 4921966 | 36996.3 |
| abc transporter atp-binding protein | EJI01_23705 | Not Available | Positive | 4921963 - 4922925 | 34975.5 |
| amino acid deaminase | EJI01_23710 | Not Available | Positive | 4922922 - 4924220 | 47169.5 |
| murr/rpir family transcriptional regulator | EJI01_23715 | Not Available | Positive | 4924232 - 4925131 | 31691.1 |
| d-aminoacylase | EJI01_23720 | Not Available | Positive | 4925124 - 4926623 | 54027.1 |
| abc transporter substrate-binding protein | EJI01_23725 | Not Available | Negative | 4926891 - 4928027 | 39461.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
