Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | EJI01_23575 | Not Available | Positive | 4895566 - 4897023 | 52329.8 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | EJI01_23580 | Not Available | Positive | 4897020 - 4897901 | 32678.9 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | EJI01_23585 | Not Available | Positive | 4897913 - 4898317 | 14865.0 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | EJI01_23590 | Not Available | Positive | 4898323 - 4899126 | 29373.2 |
| 2-dehydro-3-deoxyglucarate aldolase | EJI01_23595 | Not Available | Positive | 4899139 - 4899948 | 28362.1 |
| twin-arginine translocation pathway signal protein | EJI01_23600 | Not Available | Positive | 4900053 - 4901042 | 34176.2 |
| class ii aldolase/adducin family protein | EJI01_23605 | Not Available | Positive | 4901192 - 4902004 | 29263.1 |
| 2-dehydropantoate 2-reductase | EJI01_23610 | Not Available | Positive | 4902008 - 4902985 | 34129.7 |
| alanine racemase | EJI01_23615 | Not Available | Negative | 4903461 - 4904549 | 39575.4 |
| lysophospholipid transporter lplt | EJI01_23620 | Not Available | Positive | 4904719 - 4906023 | 46364.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
