Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase family protein | EJI01_23525 | Not Available | Positive | 4887266 - 4888525 | 46254.4 |
| zinc-finger domain-containing protein | EJI01_23530 | Not Available | Negative | 4888491 - 4888697 | 7496.06 |
| branched-chain amino acid transaminase | EJI01_23535 | Not Available | Negative | 4888702 - 4889637 | 34479.3 |
| recombination-associated protein rdgc | EJI01_23540 | Not Available | Positive | 4889758 - 4890729 | 35369.9 |
| glycerate kinase | EJI01_23545 | Not Available | Negative | 4890746 - 4891222 | 16973.8 |
| dna repair protein rada | EJI01_23550 | Not Available | Negative | 4891245 - 4892636 | 48639.9 |
| homoprotocatechuate degradation operon regulator hpar | EJI01_23555 | Not Available | Positive | 4892743 - 4893174 | 16378.0 |
| fumarylacetoacetate hydrolase | EJI01_23560 | Not Available | Positive | 4893171 - 4893794 | 22005.7 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | EJI01_23565 | Not Available | Positive | 4893791 - 4894543 | 27615.2 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_23570 | Not Available | Positive | 4894581 - 4895558 | 34122.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
