Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | EJI01_02300 | Not Available | Negative | 485682 - 487601 | 70256.8 |
| rlme family rna methyltransferase | EJI01_02305 | Not Available | Negative | 487767 - 488435 | 24273.3 |
| yhby family rna-binding protein | EJI01_02310 | Not Available | Positive | 488456 - 488935 | 17785.9 |
| glycosyltransferase | EJI01_02315 | Not Available | Positive | 488938 - 489702 | 29887.8 |
| duf4149 domain-containing protein | EJI01_02320 | Not Available | Negative | 489703 - 490119 | 15289.1 |
| transcription elongation factor grea | EJI01_02325 | Not Available | Negative | 490130 - 490609 | 17135.3 |
| 3-deoxy-d-manno-oct-2-ulosonic acid (kdo) hydroxylase | EJI01_02330 | Not Available | Negative | 490676 - 491545 | 32652.1 |
| carbamoyl-phosphate synthase large subunit | EJI01_02335 | Not Available | Negative | 491554 - 494790 | 117529.0 |
| carbamoyl-phosphate synthase small subunit | EJI01_02340 | Not Available | Negative | 494783 - 495982 | 42909.6 |
| rna methyltransferase | EJI01_02345 | Not Available | Negative | 496119 - 496898 | 27069.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
