Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | EJI01_23425 | Not Available | Positive | 4867225 - 4868715 | 52370.1 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | EJI01_23430 | Not Available | Positive | 4868717 - 4870195 | 53857.0 |
| duf4124 domain-containing protein | EJI01_23435 | Not Available | Negative | 4870215 - 4870898 | 25284.8 |
| orotate phosphoribosyltransferase | EJI01_23440 | Not Available | Negative | 4870895 - 4871596 | 24697.4 |
| exodeoxyribonuclease iii | EJI01_23445 | Not Available | Positive | 4871610 - 4872413 | 30196.7 |
| lysr family transcriptional regulator | EJI01_23450 | Not Available | Negative | 4872403 - 4873299 | 32413.7 |
| flavin-dependent oxidoreductase | EJI01_23455 | Not Available | Positive | 4873369 - 4874634 | 45833.8 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_23460 | Not Available | Positive | 4874663 - 4875625 | 33466.7 |
| sdr family oxidoreductase | EJI01_23465 | Not Available | Negative | 4875711 - 4876331 | 21740.9 |
| nuclear transport factor 2 family protein | EJI01_23470 | Not Available | Negative | 4876438 - 4876947 | 18935.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
