Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | EJI01_23375 | Not Available | Positive | 4855489 - 4856346 | 30210.6 |
| transcriptional regulator gcva | EJI01_23380 | Not Available | Negative | 4856246 - 4857250 | 35902.0 |
| aldehyde dehydrogenase family protein | EJI01_23385 | Not Available | Positive | 4857400 - 4858935 | 53636.1 |
| thiamine pyrophosphate-binding protein | EJI01_23390 | Not Available | Positive | 4858940 - 4860613 | 59710.6 |
| amino acid-binding protein | EJI01_23395 | Not Available | Negative | 4860838 - 4861989 | 39417.6 |
| penicillin-binding protein 2 | EJI01_23400 | Not Available | Negative | 4862112 - 4864082 | 71576.5 |
| rod shape-determining protein mred | EJI01_23405 | Not Available | Negative | 4864135 - 4864656 | 19163.4 |
| rod shape-determining protein mrec | EJI01_23410 | Not Available | Negative | 4864653 - 4865615 | 33942.9 |
| rod shape-determining protein | EJI01_23415 | Not Available | Negative | 4865680 - 4866723 | 36821.9 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | EJI01_23420 | Not Available | Positive | 4866929 - 4867228 | 10831.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
