Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s7 | EJI01_23225 | Not Available | Negative | 4829180 - 4829653 | 17936.1 |
| 30s ribosomal protein s12 | EJI01_23230 | Not Available | Negative | 4829798 - 4830175 | 14004.2 |
| d-alanyl-d-alanine carboxypeptidase | EJI01_23235 | Not Available | Negative | 4830351 - 4831520 | 42085.1 |
| alpha/beta fold hydrolase | EJI01_23240 | Not Available | Negative | 4831543 - 4832175 | 22034.5 |
| (2fe-2s) ferredoxin domain-containing protein | EJI01_23245 | Not Available | Negative | 4832175 - 4832528 | 12948.4 |
| vanz family protein | EJI01_23250 | Not Available | Negative | 4832580 - 4833692 | 39866.2 |
| copd family protein | EJI01_23255 | Not Available | Negative | 4833698 - 4834126 | 16110.5 |
| porphobilinogen synthase | EJI01_23260 | Not Available | Positive | 4834448 - 4835452 | 36204.6 |
| magnesium transporter cora | EJI01_23265 | Not Available | Positive | 4835470 - 4836603 | 41877.6 |
| duf4148 domain-containing protein | EJI01_23270 | Not Available | Negative | 4836658 - 4837026 | 12316.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
