Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2784 domain-containing protein | EJI01_23175 | Not Available | Negative | 4816577 - 4816951 | 13868.2 |
| alanine--trna ligase | EJI01_23180 | Not Available | Positive | 4817102 - 4819747 | 94805.3 |
| 2-dehydropantoate 2-reductase | EJI01_23185 | Not Available | Positive | 4819753 - 4820784 | 36988.2 |
| d-amino acid dehydrogenase | EJI01_23190 | Not Available | Positive | 4820954 - 4822207 | 45207.9 |
| transporter substrate-binding domain-containing protein | EJI01_23195 | Not Available | Negative | 4822198 - 4822944 | 25616.7 |
| taxi family trap transporter solute-binding subunit | EJI01_23200 | Not Available | Negative | 4823060 - 4824136 | 39238.6 |
| hypothetical protein | EJI01_23205 | Not Available | Negative | 4824214 - 4824945 | 25728.5 |
| hypothetical protein | EJI01_23210 | Not Available | Negative | 4824942 - 4826450 | 54840.1 |
| hypothetical protein | EJI01_23215 | Not Available | Negative | 4826546 - 4826734 | 6860.98 |
| elongation factor g | EJI01_23220 | Not Available | Negative | 4826997 - 4829096 | 77079.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
