Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase y family protein | EJI01_23075 | Not Available | Positive | 4793835 - 4795205 | 50952.3 |
| dna polymerase iii subunit alpha | EJI01_23080 | Not Available | Positive | 4795198 - 4798521 | 123965.0 |
| nnru family protein | EJI01_23085 | Not Available | Positive | 4798573 - 4799148 | 20612.0 |
| histidine phosphatase family protein | EJI01_23090 | Not Available | Negative | 4799151 - 4799636 | 17779.4 |
| hypothetical protein | EJI01_23095 | Not Available | Positive | 4799720 - 4800553 | 29124.9 |
| elongation factor g | EJI01_23100 | Not Available | Positive | 4800667 - 4802727 | 73996.7 |
| amidase | EJI01_23105 | Not Available | Negative | 4802748 - 4804280 | 54443.2 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_23110 | Not Available | Negative | 4804304 - 4805287 | 34189.4 |
| fad-binding oxidoreductase | EJI01_23115 | Not Available | Negative | 4805400 - 4806539 | 40508.9 |
| xre family transcriptional regulator | EJI01_23120 | Not Available | Positive | 4806726 - 4807292 | 20530.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
