Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EJI01_22975 | Not Available | Negative | 4772153 - 4773079 | 34181.6 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | EJI01_22980 | Not Available | Positive | 4773150 - 4775477 | 86415.4 |
| hypothetical protein | EJI01_22985 | Not Available | Positive | 4775989 - 4776210 | 7352.92 |
| nuclear transport factor 2 family protein | EJI01_22990 | Not Available | Negative | 4776289 - 4776669 | 14459.9 |
| hypothetical protein | EJI01_22995 | Not Available | Negative | 4776776 - 4777504 | 25303.7 |
| merr family transcriptional regulator | EJI01_23000 | Not Available | Negative | 4777632 - 4777955 | 11631.9 |
| j domain-containing protein | EJI01_23005 | Not Available | Negative | 4777960 - 4778931 | 35867.3 |
| histidine phosphatase family protein | EJI01_23010 | Not Available | Negative | 4778961 - 4779575 | 21581.0 |
| acylase | EJI01_23015 | Not Available | Negative | 4779701 - 4782076 | 84431.5 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | EJI01_23020 | Not Available | Negative | 4782305 - 4782949 | 22725.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
