Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline hydroxylase | EJI01_22875 | Not Available | Positive | 4750092 - 4750775 | 25750.9 |
| dna oxidative demethylase alkb | EJI01_22880 | Not Available | Positive | 4750772 - 4751524 | 27146.8 |
| duf4863 family protein | EJI01_22885 | Not Available | Negative | 4751528 - 4752061 | 19017.3 |
| hypothetical protein | EJI01_22890 | Not Available | Negative | 4752067 - 4753059 | 34796.5 |
| lysr family transcriptional regulator | EJI01_22895 | Not Available | Positive | 4753155 - 4754159 | 37080.0 |
| nitroreductase | EJI01_22900 | Not Available | Positive | 4754218 - 4754940 | 26255.2 |
| hypothetical protein | EJI01_22905 | Not Available | Negative | 4754937 - 4756571 | 58761.8 |
| mbl fold metallo-hydrolase | EJI01_22910 | Not Available | Negative | 4756568 - 4757641 | 39495.2 |
| pas domain s-box protein | EJI01_22915 | Not Available | Negative | 4757667 - 4758233 | 21014.4 |
| coa transferase subunit a | EJI01_22920 | Not Available | Positive | 4758327 - 4759142 | 28494.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
