Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isopenicillin n synthase family oxygenase | EJI01_22725 | Not Available | Negative | 4720773 - 4721759 | 36313.1 |
| cysteine hydrolase | EJI01_22730 | Not Available | Negative | 4721756 - 4722451 | 25712.5 |
| abc transporter permease | EJI01_22735 | Not Available | Negative | 4722448 - 4723374 | 32211.3 |
| abc transporter permease | EJI01_22740 | Not Available | Negative | 4723374 - 4724495 | 40028.7 |
| abc transporter atp-binding protein | EJI01_22745 | Not Available | Negative | 4724509 - 4726029 | 53694.9 |
| bmp family abc transporter substrate-binding protein | EJI01_22750 | Not Available | Negative | 4726026 - 4727117 | 38556.1 |
| glyoxalase | EJI01_22755 | Not Available | Negative | 4727107 - 4727514 | 15097.0 |
| isopenicillin n synthase family oxygenase | EJI01_22760 | Not Available | Negative | 4727516 - 4728517 | 36305.2 |
| hth-type transcriptional regulator rutr | EJI01_22765 | Not Available | Positive | 4728754 - 4729482 | 27198.8 |
| pyrimidine utilization flavin reductase protein f | EJI01_22770 | Not Available | Negative | 4729496 - 4729990 | 17190.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
