Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_22565 | Not Available | Negative | 4690126 - 4690848 | 26751.7 |
| type iv secretion system protein | EJI01_22570 | Not Available | Negative | 4690995 - 4692050 | 37543.5 |
| type iv secretion system family protein | EJI01_22575 | Not Available | Negative | 4692321 - 4693055 | 26808.0 |
| virb4 family type iv secretion/conjugal transfer atpase | EJI01_22580 | Not Available | Negative | 4693048 - 4695570 | 94545.2 |
| type iv secretion system protein virb3 | EJI01_22585 | Not Available | Negative | 4695582 - 4695947 | 13929.4 |
| transposase | EJI01_22590 | Not Available | Negative | 4695970 - 4696209 | 8188.37 |
| hypothetical protein | EJI01_22595 | Not Available | Negative | 4696407 - 4696958 | 19418.1 |
| para family protein | EJI01_22600 | Not Available | Positive | 4697257 - 4698069 | 29216.6 |
| parb/repb/spo0j family partition protein | EJI01_22605 | Not Available | Positive | 4698066 - 4698977 | 33027.4 |
| site-specific integrase | EJI01_22610 | Not Available | Negative | 4699102 - 4700130 | 37839.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
