Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| relaxase | EJI01_22515 | Not Available | Positive | 4679654 - 4680715 | 39700.6 |
| xre family transcriptional regulator | EJI01_22520 | Not Available | Positive | 4680943 - 4681263 | 11305.7 |
| type ii toxin-antitoxin system hipa family toxin | EJI01_22525 | Not Available | Positive | 4681270 - 4682610 | 49183.2 |
| hypothetical protein | EJI01_22530 | Not Available | Negative | 4682607 - 4682897 | 10649.0 |
| conjugal transfer protein trax | EJI01_22535 | Not Available | Negative | 4683108 - 4683818 | 26545.6 |
| hypothetical protein | EJI01_22540 | Not Available | Negative | 4683833 - 4684933 | 40568.7 |
| type iv secretory system conjugative dna transfer family protein | EJI01_22545 | Not Available | Negative | 4684954 - 4686891 | 71941.8 |
| p-type dna transfer atpase virb11 | EJI01_22550 | Not Available | Negative | 4686857 - 4687978 | 40832.9 |
| trbi/virb10 family protein | EJI01_22555 | Not Available | Negative | 4687947 - 4689293 | 47292.4 |
| p-type conjugative transfer protein virb9 | EJI01_22560 | Not Available | Negative | 4689290 - 4690129 | 30822.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
