Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4089 domain-containing protein | EJI01_22460 | Not Available | Negative | 4668526 - 4668732 | 7264.66 |
| atp-binding cassette domain-containing protein | EJI01_22465 | Not Available | Negative | 4668729 - 4669541 | 30542.0 |
| abc transporter permease | EJI01_22470 | Not Available | Negative | 4669559 - 4670380 | 29064.1 |
| abc transporter substrate-binding protein | EJI01_22475 | Not Available | Negative | 4670383 - 4671384 | 35530.1 |
| allophanate hydrolase | EJI01_22480 | Not Available | Negative | 4671381 - 4673114 | 59806.6 |
| duf1738 domain-containing protein | EJI01_22490 | Not Available | Positive | 4675051 - 4675974 | 33922.4 |
| hypothetical protein | EJI01_22495 | Not Available | Negative | 4676139 - 4676699 | 19960.8 |
| hypothetical protein | EJI01_22500 | Not Available | Positive | 4676903 - 4677130 | 7973.93 |
| duf1016 domain-containing protein | EJI01_22505 | Not Available | Negative | 4677422 - 4678561 | 43549.3 |
| hypothetical protein | EJI01_22510 | Not Available | Positive | 4679092 - 4679646 | 20107.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
