Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_22360 | Not Available | Negative | 4646397 - 4646684 | 10583.5 |
| hypothetical protein | EJI01_22365 | Not Available | Negative | 4646681 - 4647097 | 15204.2 |
| parb/repb/spo0j family partition protein | EJI01_22370 | Not Available | Negative | 4647765 - 4648847 | 38744.8 |
| cobyrinic acid a,c-diamide synthase | EJI01_22375 | Not Available | Negative | 4649178 - 4650419 | 44318.8 |
| repb family plasmid replication initiator protein | EJI01_22380 | Not Available | Positive | 4650969 - 4652342 | 51560.8 |
| fha domain-containing protein | EJI01_22385 | Not Available | Positive | 4652638 - 4653204 | 20293.0 |
| hypothetical protein | EJI01_22390 | Not Available | Negative | 4653477 - 4653692 | 8137.51 |
| hypothetical protein | EJI01_22395 | Not Available | Negative | 4653702 - 4653893 | 7227.68 |
| lrp/asnc family transcriptional regulator | EJI01_22400 | Not Available | Negative | 4654505 - 4655008 | 18600.3 |
| indolepyruvate ferredoxin oxidoreductase family protein | EJI01_22405 | Not Available | Positive | 4655100 - 4658693 | 129688.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
