Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin--nadp reductase | EJI01_22310 | Not Available | Positive | 4636414 - 4637190 | 29072.2 |
| aspartate 1-decarboxylase | EJI01_22315 | Not Available | Positive | 4637778 - 4638179 | 14452.1 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | EJI01_22320 | Not Available | Positive | 4638251 - 4638760 | 18155.1 |
| duf4365 domain-containing protein | EJI01_22325 | Not Available | Negative | 4638761 - 4638996 | 8621.97 |
| xre family transcriptional regulator | EJI01_22330 | Not Available | Negative | 4639994 - 4640665 | 23981.0 |
| xre family transcriptional regulator | EJI01_22335 | Not Available | Positive | 4640900 - 4641163 | 9644.78 |
| hypothetical protein | EJI01_22340 | Not Available | Negative | 4641284 - 4641904 | 22121.2 |
| chorismate mutase family protein | EJI01_22345 | Not Available | Negative | 4642035 - 4642442 | 14772.5 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_22350 | Not Available | Negative | 4642454 - 4643503 | 36425.4 |
| integrase | EJI01_22355 | Not Available | Negative | 4644511 - 4646400 | 69025.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
