Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EJI01_21895 | Not Available | Positive | 4535150 - 4535905 | 27521.1 |
| metal abc transporter permease | EJI01_21900 | Not Available | Positive | 4535902 - 4536774 | 29840.4 |
| metal abc transporter substrate-binding protein | EJI01_21905 | Not Available | Positive | 4536776 - 4537657 | 31329.3 |
| gtp-binding protein | EJI01_21910 | Not Available | Positive | 4537712 - 4538719 | 37386.9 |
| kelch-like protein | EJI01_21920 | Not Available | Negative | 4539241 - 4540875 | 54775.9 |
| gnat family n-acetyltransferase | EJI01_21925 | Not Available | Negative | 4541711 - 4542088 | 14134.9 |
| hypothetical protein | EJI01_21930 | Not Available | Positive | 4542377 - 4542652 | 10159.2 |
| hypothetical protein | EJI01_21940 | Not Available | Negative | 4542837 - 4543748 | 32647.7 |
| phosphoesterase | EJI01_21945 | Not Available | Negative | 4543562 - 4545991 | 90209.2 |
| gamma-glutamylcyclotransferase | EJI01_21950 | Not Available | Positive | 4546150 - 4546938 | 29407.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
