Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_21715 | Not Available | Negative | 4497305 - 4497622 | 11866.3 |
| two-component system response regulator kdpe | EJI01_21720 | Not Available | Negative | 4498094 - 4498786 | 25441.5 |
| duf4118 domain-containing protein | EJI01_21725 | Not Available | Negative | 4498790 - 4501543 | 98173.0 |
| potassium-transporting atpase subunit kdpc | EJI01_21730 | Not Available | Negative | 4501952 - 4502521 | 19562.6 |
| k(+)-transporting atpase subunit b | EJI01_21735 | Not Available | Negative | 4502532 - 4504643 | 74126.0 |
| potassium-transporting atpase subunit kdpa | EJI01_21740 | Not Available | Negative | 4504712 - 4506439 | 60032.2 |
| k(+)-transporting atpase subunit f | EJI01_21745 | Not Available | Negative | 4506441 - 4506539 | 3486.45 |
| s9 family peptidase | EJI01_21755 | Not Available | Negative | 4507476 - 4509593 | 77803.0 |
| glycosyltransferase | EJI01_21760 | Not Available | Negative | 4509769 - 4511028 | 43562.5 |
| trka family potassium uptake protein | EJI01_21765 | Not Available | Negative | 4511182 - 4511886 | 25202.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
