Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | EJI01_21510 | Not Available | Negative | 4454402 - 4454782 | 13526.0 |
| sdr family oxidoreductase | EJI01_21515 | Not Available | Negative | 4454779 - 4455537 | 26318.8 |
| coa-binding protein | EJI01_21520 | Not Available | Negative | 4455534 - 4457660 | 73077.0 |
| enoyl-coa hydratase/isomerase family protein | EJI01_21525 | Not Available | Negative | 4457664 - 4458425 | 27779.7 |
| acyl-coa dehydrogenase | EJI01_21530 | Not Available | Negative | 4458422 - 4459561 | 40281.3 |
| acyl-coa dehydrogenase | EJI01_21535 | Not Available | Negative | 4459565 - 4460752 | 43665.1 |
| fcd domain-containing protein | EJI01_21540 | Not Available | Negative | 4460773 - 4461735 | 34596.5 |
| llm class flavin-dependent oxidoreductase | EJI01_21545 | Not Available | Negative | 4461754 - 4462845 | 40311.6 |
| lysr family transcriptional regulator | EJI01_21550 | Not Available | Positive | 4462946 - 4463857 | 33932.0 |
| smp-30/gluconolactonase/lre family protein | EJI01_21555 | Not Available | Negative | 4463866 - 4464747 | 31785.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
