Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | EJI01_21460 | Not Available | Negative | 4443635 - 4444537 | 34621.3 |
| hypothetical protein | EJI01_21465 | Not Available | Negative | 4444554 - 4445126 | 21575.1 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | EJI01_21470 | Not Available | Negative | 4445287 - 4447497 | 78241.8 |
| xanthine dehydrogenase family protein subunit m | EJI01_21475 | Not Available | Negative | 4447500 - 4448450 | 33458.3 |
| aldehyde dehydrogenase iron-sulfur subunit | EJI01_21480 | Not Available | Negative | 4448447 - 4449094 | 22263.6 |
| arac family transcriptional regulator | EJI01_21485 | Not Available | Positive | 4449296 - 4450309 | 37249.0 |
| hypothetical protein | EJI01_21490 | Not Available | Negative | 4450290 - 4451429 | 40138.4 |
| duf3500 domain-containing protein | EJI01_21495 | Not Available | Negative | 4451513 - 4452673 | 42036.9 |
| acyl-coa dehydrogenase | EJI01_21500 | Not Available | Negative | 4452701 - 4453870 | 41761.2 |
| nuclear transport factor 2 family protein | EJI01_21505 | Not Available | Negative | 4453875 - 4454405 | 19784.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
