Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1688 family protein | EJI01_02100 | Not Available | Positive | 446035 - 447444 | 50841.1 |
| uracil phosphoribosyltransferase | EJI01_02105 | Not Available | Positive | 447474 - 448103 | 23089.5 |
| bmp family abc transporter substrate-binding protein | EJI01_02110 | Not Available | Positive | 448257 - 449258 | 36084.6 |
| abc transporter atp-binding protein | EJI01_02115 | Not Available | Positive | 449405 - 450931 | 53824.4 |
| abc transporter permease | EJI01_02120 | Not Available | Positive | 451017 - 452078 | 36505.8 |
| abc transporter permease | EJI01_02125 | Not Available | Positive | 452075 - 452998 | 32560.6 |
| cytosine deaminase | EJI01_02130 | Not Available | Positive | 453003 - 454283 | 46130.7 |
| n-acetyltransferase | EJI01_02135 | Not Available | Negative | 454286 - 454807 | 18582.5 |
| duf3224 domain-containing protein | EJI01_02140 | Not Available | Negative | 454830 - 455234 | 14093.8 |
| exodeoxyribonuclease i | EJI01_02145 | Not Available | Negative | 455252 - 456691 | 54079.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
