Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tip protein vgrg | EJI01_21210 | Not Available | Negative | 4376703 - 4379075 | 87116.2 |
| tetratricopeptide repeat protein | EJI01_21215 | Not Available | Negative | 4379100 - 4380485 | 49834.1 |
| hypothetical protein | EJI01_21220 | Not Available | Negative | 4380487 - 4381533 | 37860.3 |
| type vi secretion system atpase tssh | EJI01_21225 | Not Available | Negative | 4381550 - 4384225 | 97671.1 |
| type vi secretion system baseplate subunit tssg | EJI01_21230 | Not Available | Negative | 4384264 - 4385355 | 40806.7 |
| type vi secretion system baseplate subunit tssf | EJI01_21235 | Not Available | Negative | 4385319 - 4387223 | 69691.0 |
| type vi secretion system baseplate subunit tsse | EJI01_21240 | Not Available | Negative | 4387320 - 4387835 | 19535.6 |
| virulence protein scie type | EJI01_21245 | Not Available | Negative | 4387828 - 4388631 | 29510.2 |
| hypothetical protein | EJI01_21250 | Not Available | Negative | 4388780 - 4389334 | 20016.8 |
| caspase family protein | EJI01_21255 | Not Available | Negative | 4389344 - 4391308 | 69604.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
