Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein tssa | EJI01_21160 | Not Available | Positive | 4365696 - 4366727 | 36217.4 |
| type vi secretion system contractile sheath small subunit | EJI01_21165 | Not Available | Positive | 4366780 - 4367295 | 18557.3 |
| type vi secretion system contractile sheath large subunit | EJI01_21170 | Not Available | Positive | 4367329 - 4368825 | 55529.4 |
| type vi secretion system tube protein hcp | EJI01_21175 | Not Available | Positive | 4368950 - 4369432 | 17079.1 |
| serine/threonine-protein phosphatase | EJI01_21180 | Not Available | Negative | 4369483 - 4370259 | 27610.7 |
| type vi secretion system-associated fha domain protein tagh | EJI01_21185 | Not Available | Negative | 4370285 - 4371889 | 54724.3 |
| duf4150 domain-containing protein | EJI01_21190 | Not Available | Negative | 4371913 - 4372308 | 13101.9 |
| duf3540 domain-containing protein | EJI01_21195 | Not Available | Negative | 4372319 - 4372957 | 22980.5 |
| pentapeptide repeat-containing protein | EJI01_21200 | Not Available | Negative | 4372963 - 4374039 | 38269.2 |
| duf2169 domain-containing protein | EJI01_21205 | Not Available | Negative | 4374036 - 4376687 | 95546.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
