Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyryl-coa dehydrogenase | EJI01_21110 | Not Available | Negative | 4354701 - 4355705 | 36011.4 |
| glycerol-3-phosphate dehydrogenase | EJI01_21115 | Not Available | Negative | 4355695 - 4356768 | 38637.2 |
| phosphoglycolate phosphatase | EJI01_21120 | Not Available | Negative | 4356853 - 4357530 | 24232.0 |
| duf1266 domain-containing protein | EJI01_21125 | Not Available | Negative | 4357621 - 4358562 | 34509.3 |
| response regulator transcription factor | EJI01_21130 | Not Available | Negative | 4358439 - 4359866 | 52108.2 |
| hypothetical protein | EJI01_21135 | Not Available | Negative | 4360093 - 4361568 | 52562.4 |
| response regulator transcription factor | EJI01_21140 | Not Available | Negative | 4361716 - 4362387 | 23689.1 |
| type iv / vi secretion system, dotu | EJI01_21145 | Not Available | Positive | 4362620 - 4363948 | 47956.8 |
| hypothetical protein | EJI01_21150 | Not Available | Positive | 4363970 - 4365058 | 40304.1 |
| type vi secretion system lipoprotein tssj | EJI01_21155 | Not Available | Negative | 4365067 - 4365624 | 19824.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
