Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiolase family protein | EJI01_21060 | Not Available | Negative | 4342853 - 4344022 | 41608.6 |
| atp-dependent acyl-coa ligase | EJI01_21065 | Not Available | Negative | 4344019 - 4345641 | 58076.2 |
| phenylpropionate dioxygenase | EJI01_21070 | Not Available | Negative | 4345649 - 4346131 | 18778.2 |
| oxidoreductase | EJI01_21075 | Not Available | Negative | 4346271 - 4347584 | 49531.7 |
| oxidoreductase | EJI01_21080 | Not Available | Negative | 4347600 - 4348583 | 36028.1 |
| indolepyruvate oxidoreductase subunit beta family protein | EJI01_21085 | Not Available | Negative | 4348605 - 4350098 | 54032.2 |
| indolepyruvate ferredoxin oxidoreductase subunit alpha | EJI01_21090 | Not Available | Negative | 4350236 - 4352419 | 78311.8 |
| marr family transcriptional regulator | EJI01_21095 | Not Available | Positive | 4352557 - 4353042 | 18100.8 |
| zinc-binding alcohol dehydrogenase family protein | EJI01_21100 | Not Available | Negative | 4353050 - 4353907 | 29817.2 |
| alpha/beta fold hydrolase | EJI01_21105 | Not Available | Negative | 4353904 - 4354704 | 28977.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
