Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter atp-binding protein/permease | EJI01_21010 | Not Available | Negative | 4331237 - 4333021 | 63209.8 |
| branched-chain amino acid abc transporter permease | EJI01_21015 | Not Available | Negative | 4333105 - 4334160 | 36224.7 |
| abc transporter substrate-binding protein | EJI01_21020 | Not Available | Negative | 4334202 - 4335362 | 40472.0 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | EJI01_21025 | Not Available | Negative | 4335388 - 4335852 | 17367.8 |
| oxidoreductase | EJI01_21030 | Not Available | Negative | 4335849 - 4337150 | 48633.6 |
| abc transporter substrate-binding protein | EJI01_21035 | Not Available | Negative | 4337281 - 4338426 | 39834.0 |
| abc transporter substrate-binding protein | EJI01_21040 | Not Available | Negative | 4338555 - 4339712 | 40573.9 |
| sdr family oxidoreductase | EJI01_21045 | Not Available | Negative | 4339847 - 4340578 | 25702.2 |
| cyclase family protein | EJI01_21050 | Not Available | Negative | 4340703 - 4341515 | 29700.1 |
| sdr family nad(p)-dependent oxidoreductase | EJI01_21055 | Not Available | Negative | 4341517 - 4342767 | 45310.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
