Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class v-fold plp-dependent enzyme | EJI01_20860 | Not Available | Negative | 4305379 - 4306620 | 44552.7 |
| gntr family transcriptional regulator | EJI01_20865 | Not Available | Positive | 4306748 - 4307446 | 25934.4 |
| fad-binding oxidoreductase | EJI01_20870 | Not Available | Positive | 4307457 - 4310501 | 109403.0 |
| marr family transcriptional regulator | EJI01_20875 | Not Available | Negative | 4310521 - 4310946 | 15891.1 |
| tripartite tricarboxylate transporter tctb family protein | EJI01_20880 | Not Available | Positive | 4311171 - 4311656 | 16654.2 |
| tripartite tricarboxylate transporter permease | EJI01_20885 | Not Available | Positive | 4311670 - 4313184 | 53144.4 |
| eama family transporter | EJI01_20890 | Not Available | Negative | 4313239 - 4314132 | 30878.9 |
| marr family transcriptional regulator | EJI01_20895 | Not Available | Positive | 4314228 - 4314740 | 18747.0 |
| coa pyrophosphatase | EJI01_20900 | Not Available | Positive | 4314744 - 4315406 | 23714.5 |
| abc transporter substrate-binding protein | EJI01_20905 | Not Available | Negative | 4315426 - 4316493 | 38626.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
