Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | EJI01_20655 | Not Available | Positive | 4262350 - 4263123 | 28466.8 |
| hypothetical protein | EJI01_20660 | Not Available | Negative | 4263169 - 4263390 | 7714.12 |
| barnase inhibitor | EJI01_20665 | Not Available | Negative | 4263369 - 4263803 | 16473.6 |
| guanine-specific ribonuclease n1 and t1 | EJI01_20670 | Not Available | Negative | 4263851 - 4264264 | 15164.0 |
| nadp-dependent malic enzyme | EJI01_20675 | Not Available | Negative | 4264444 - 4266783 | 84457.6 |
| hypothetical protein | EJI01_20680 | Not Available | Positive | 4266941 - 4267996 | 37930.8 |
| duf4178 domain-containing protein | EJI01_20685 | Not Available | Positive | 4268074 - 4269552 | 53293.8 |
| duf350 domain-containing protein | EJI01_20690 | Not Available | Positive | 4269574 - 4269795 | 8030.25 |
| polyamine aminopropyltransferase | EJI01_20695 | Not Available | Positive | 4269893 - 4271434 | 55902.4 |
| fad-binding protein | EJI01_20700 | Not Available | Positive | 4271435 - 4273003 | 56810.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
