Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf72 domain-containing protein | EJI01_20605 | Not Available | Negative | 4250237 - 4251046 | 29816.5 |
| m20/m25/m40 family metallo-hydrolase | EJI01_20610 | Not Available | Positive | 4251163 - 4252656 | 53621.9 |
| alpha/beta hydrolase | EJI01_20615 | Not Available | Positive | 4252653 - 4253504 | 30486.6 |
| mfs transporter | EJI01_20620 | Not Available | Negative | 4253501 - 4254676 | 41182.2 |
| duf937 domain-containing protein | EJI01_20625 | Not Available | Negative | 4254687 - 4255166 | 15351.6 |
| m20/m25/m40 family metallo-hydrolase | EJI01_20630 | Not Available | Negative | 4255198 - 4256556 | 47377.1 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | EJI01_20635 | Not Available | Negative | 4256604 - 4257314 | 25210.5 |
| aminoglycoside phosphotransferase | EJI01_20640 | Not Available | Negative | 4257335 - 4258429 | 41119.1 |
| lps-assembly protein lptd | EJI01_20645 | Not Available | Positive | 4258524 - 4260914 | 89102.9 |
| molecular chaperone sura | EJI01_20650 | Not Available | Positive | 4260926 - 4262338 | 51037.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
