Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | EJI01_20555 | Not Available | Positive | 4242622 - 4243170 | 19411.3 |
| lps export abc transporter periplasmic protein lptc | EJI01_20560 | Not Available | Positive | 4243167 - 4243814 | 23686.5 |
| sdr family oxidoreductase | EJI01_20565 | Not Available | Positive | 4243811 - 4244584 | 27251.9 |
| rna-binding protein | EJI01_20570 | Not Available | Negative | 4244665 - 4245195 | 16452.8 |
| tmem165/gdt1 family protein | EJI01_20575 | Not Available | Positive | 4245637 - 4246203 | 20304.5 |
| homoserine o-acetyltransferase | EJI01_20580 | Not Available | Positive | 4246323 - 4247477 | 42006.6 |
| methionine biosynthesis protein metw | EJI01_20585 | Not Available | Positive | 4247474 - 4248061 | 22062.6 |
| yigz family protein | EJI01_20590 | Not Available | Positive | 4248072 - 4248659 | 20449.8 |
| ion transporter | EJI01_20595 | Not Available | Negative | 4248604 - 4249521 | 33477.7 |
| polymer-forming cytoskeletal protein | EJI01_20600 | Not Available | Positive | 4249685 - 4250224 | 18236.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
