Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | EJI01_20505 | Not Available | Negative | 4232345 - 4233724 | 51633.2 |
| 50s ribosomal protein l34 | EJI01_20510 | Not Available | Positive | 4234008 - 4234142 | 5110.49 |
| ribonuclease p protein component | EJI01_20515 | Not Available | Positive | 4234218 - 4234604 | 14126.1 |
| membrane protein insertion efficiency factor yidd | EJI01_20520 | Not Available | Positive | 4234604 - 4234891 | 10424.5 |
| membrane protein insertase yidc | EJI01_20525 | Not Available | Positive | 4234888 - 4236567 | 61705.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | EJI01_20530 | Not Available | Positive | 4236637 - 4238043 | 49533.3 |
| cyclic nucleotide-binding domain-containing protein | EJI01_20535 | Not Available | Positive | 4238129 - 4238596 | 16791.3 |
| hypothetical protein | EJI01_20540 | Not Available | Positive | 4239000 - 4239578 | 22599.6 |
| potassium transporter | EJI01_20545 | Not Available | Negative | 4239566 - 4241551 | 71775.3 |
| kpsf/gutq family sugar-phosphate isomerase | EJI01_20550 | Not Available | Positive | 4241621 - 4242622 | 34704.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
